PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89852.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 141aa    MW: 15939.8 Da    PI: 8.2234
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89852.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP251.82.1e-162164148
         AP2  1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaia 48
                +gy GVr+++ +gr++AeIr p++   + r++lg+f+taeeAa a++ 
  RWR89852.1 21 TGYLGVRRRP-WGRYAAEIRNPYT---KERHWLGTFDTAEEAAFAYDM 64
                699*******.**********865...5******************96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 141 aa     Download sequence    
MADLSRQFNQ NHRSRRSKES TGYLGVRRRP WGRYAAEIRN PYTKERHWLG TFDTAEEAAF  60
AYDMSSISIS GIGRARTNFC YPFLAPLSPP TPPPPPPPPP TPVLEEKDQN YFPDDDESLT  120
IAAILQSFRH SHTLSSSCSV L
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G12890.17e-27ERF family protein