PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89854.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NF-YB
Protein Properties Length: 162aa    MW: 17800 Da    PI: 5.3652
Description NF-YB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89854.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NF-YB181.28.7e-5712107297
       NF-YB   2 reqdrflPianvsrimkkvlPanakiskdaketvqecvsefisfvtseasdkcqrekrktingddllwalatlGfedyveplkvylkkyrelegek 97 
                 +eqdrflPianvsrimkk lPanakisk+aketvqec sefisf+t+easdkcqrekrktingddllwa++tlGfe+yveplk+yl++yre+egek
  RWR89854.1  12 KEQDRFLPIANVSRIMKKSLPANAKISKEAKETVQECTSEFISFITGEASDKCQREKRKTINGDDLLWAMTTLGFEKYVEPLKAYLNRYRETEGEK 107
                 89********************************************************************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 162 aa     Download sequence    
MAGRNPCNSP TKEQDRFLPI ANVSRIMKKS LPANAKISKE AKETVQECTS EFISFITGEA  60
SDKCQREKRK TINGDDLLWA MTTLGFEKYV EPLKAYLNRY RETEGEKNSI VRQGDQSPNE  120
ELDGADNVGA NGANLVTGPT NKGLLSFDGG FYSQIPLSFG GV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G14540.13e-66NF-YB family protein