PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89928.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 260aa    MW: 29770.1 Da    PI: 8.9837
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89928.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H219.52.7e-06117136120
                 EEETTTTEEESSHHHHHHHH CS
     zf-C2H2   1 ykCpdCgksFsrksnLkrHi 20 
                 ++C++C k+F+r  nL+ H+
  RWR89928.1 117 FSCHICYKTFNRYNNLQMHM 136
                 89*****************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 260 aa     Download sequence    
MDSKPISFGK KSKDFNPVHE ADQLMNESLS LMTQEPLEPL PLLSCLLRPH HPSSQENLPR  60
QQDGHQENNV TVALQIGLPN CPSEPAKSNE EKEDQMLKAT QYWIPTLAQI LTGFAHFSCH  120
ICYKTFNRYN NLQMHMWGHG SQYRRGPESL RGAQPSAIFG IPCYCCTLGC RNNIEHPRAK  180
PLKDFRTLQT HYKRKHGMKP FMCCKCGKLL AVKGDWRTHE KNCGRLWLCY CGSDFKHKRS  240
LKDHVRAFGS GHGFNNFNSV
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G34790.14e-99C2H2 family protein