PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89934.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 292aa    MW: 32932 Da    PI: 8.7
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89934.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix75.67.8e-2444130286
    trihelix   2 WtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                 W+++e+++Li+a++e++ +l+rg+lk+++Weev++ +    ++++ +++++qC++k+e+l+kry++ k + ++  s sss +p+f++++
  RWR89934.1  44 WSHSETMHLIDAYQEKWYSLNRGQLKAHQWEEVAASVaarsASHPPTKTATQCRHKIEKLRKRYRADKLRPSS--SSSSSPWPFFHRMD 130
                 *************************************999999999********************9999998..567778*******7 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MADTAASPSP PSSPSSPSPP KKPKLLLPPP PPAPAPGPTV PASWSHSETM HLIDAYQEKW  60
YSLNRGQLKA HQWEEVAASV AARSASHPPT KTATQCRHKI EKLRKRYRAD KLRPSSSSSS  120
SPWPFFHRMD LLERGPTSDP PRTSATTTDD DDDDDPPAAG PGNNTRSINH ILRRPQPPSM  180
LSPLDRSFPR CSRSPRFWKR SSFEPVDEEE DEEEEEDPMS ELAAVVRSFG EGLVRVEKMK  240
MEMMREAERN RMEMEMKRTE MIMKSQQRIA DAIADAFRPR KKPKNSQELS TN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G44730.17e-21Trihelix family protein