PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR89944.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 213aa    MW: 24037.9 Da    PI: 8.3251
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR89944.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding52.51.2e-161155448
                     S-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  4 WTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     WT+eEd++l ++   +G g+W+ Ia+  g++R++ +c+srw +yl
       RWR89944.1 11 WTKEEDQILMEYLSAHGRGQWNDIAKAAGLKRSGRSCRSRWMNYL 55
                     *******************************************97 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MERHQYKKRL WTKEEDQILM EYLSAHGRGQ WNDIAKAAGL KRSGRSCRSR WMNYLCPNVK  60
HKEFTEEDKK NSSYVCIISL ETGRVPGRTD NQVKNHWKTH LGKKFKSRNN NEVGPSTTLF  120
GDDGGQEGKS LELLASGNST SKLPSNDGYC SIVTRPLVAD GFQKGTIMPR APQEQTMSEF  180
HLNSSPSNIS DPDTTSLIEF LDGFSIDVAL FDF
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G14750.11e-38MYB family protein