PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90069.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 259aa    MW: 29106.6 Da    PI: 7.8896
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90069.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP252.21.5e-16105155155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GVr+++ +grW AeI+dp++   r r +lg+f+taeeAa+ +++ + +++g
  RWR90069.1 105 SNYRGVRQRP-SGRWGAEIHDPKK---RVREWLGTFDTAEEAARVYDRKAIEFRG 155
                 57********.7*********954...5999*********************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MESQGRSSKL APREKGETSR SVAISSRINI EEADFIILST NKHFLSNWPF HCSSSSSKYA  60
FFPHAGEDPC SMCGIEDCLG CNMFPPPSDE NKEKEKKKKK KKKRSNYRGV RQRPSGRWGA  120
EIHDPKKRVR EWLGTFDTAE EAARVYDRKA IEFRGAQAKL NFQPPDLILL EGQQQQQPQQ  180
HQMVPSTALT IMPWNLEAPG ETAFGGGNLR EAAFGEGEFQ NLARIGDYEY AIAASSNAFS  240
SAMNSETLEE QVLRERAVN
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
192101KEKEKKKKKK
296102KKKKKKK
396104KKKKKKKKR
497103KKKKKKK
598104KKKKKKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G11140.17e-24ERF family protein