PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90071.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 249aa    MW: 27649.8 Da    PI: 6.2563
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90071.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP261.12.6e-1999148155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++  g+WvAeI+dp     r +r++lg+f taeeAa+a+++ + +++g
  RWR90071.1  99 PKYRGVRQRS--GKWVAEIHDPE----RrRRVWLGTFNTAEEAARAYDEKAIEFRG 148
                 79****9865..*********62....34************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 249 aa     Download sequence    
MRATFREEGE PSRVVLSSGL TREEENYIIL STYKHVLFND IVDHSSPNVQ TLPFQGSGDV  60
APSTQSDGSP ILLNVSEGPC SSCGLGIEKC LGCNLFSPPK YRGVRQRSGK WVAEIHDPER  120
RRRVWLGTFN TAEEAARAYD EKAIEFRGAR ARLNFPSFEF GPPPDHTLLE GQQEQQQPST  180
SHPTSLNWEA PPEATFEGNM VEALGGEEFR NWVKIGNDQY ALAALSSAST GEKHGDRIIK  240
KRTRKSSLT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.11e-22ERF family protein