PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90072.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 256aa    MW: 28747.3 Da    PI: 5.6621
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90072.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2574.7e-18111161155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GVr++  +grW+AeI+dp++   ++r++lg+f+taeeAa+a ++ + +++g
  RWR90072.1 111 SNYRGVRQRQ-SGRWAAEIQDPVK---KARVWLGTFDTAEEAARAFDKKAFEFHG 161
                 57*****999.7*********654...5***********************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 256 aa     Download sequence    
MNKRISRVEL GETSRVGLRT GLTQEGENST ILSTYKCVLF NEAVDGSIDH DLTMPLHGIG  60
DTLPSSESLI LLNVREDPCS TCGLGIEECL GCNLFSPPYE NKEEEKKKKR SNYRGVRQRQ  120
SGRWAAEIQD PVKKARVWLG TFDTAEEAAR AFDKKAFEFH GIRAKLNFPY TEYRAPADHS  180
LLEWQQQHHV LPGTSPLMGS NWESPVEMAS GVNMWEVLGG EEYQDWVRID KSKYAIAALS  240
SDPISATTTR EIHGDK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.19e-24ERF family protein