PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90078.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 272aa    MW: 30075.3 Da    PI: 4.6935
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90078.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP262.59.2e-20119169155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55 
                 s y+GVr++  +grW+AeI+dp++   ++r++lg+f+taeeAa+a+++ +++++g
  RWR90078.1 119 SNYRGVRQRQ-SGRWAAEIQDPTK---KARVWLGTFDTAEEAARAYDKKALEFRG 169
                 57*****999.7*********864...6************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 272 aa     Download sequence    
MENQGRTSKQ AKTMREDGET SRAGLRTGLT QEGENAITLS TYKYVLFNEA VDGSVDHDLA  60
MPLHGIGDTL PSSESLILLN VREDPCSTCG LGIEECLGCN LFSPPYGNKE AEEEEKKRSN  120
YRGVRQRQSG RWAAEIQDPT KKARVWLGTF DTAEEAARAY DKKALEFRGT RARLNFPHRT  180
PADHSLLEWQ QQHHMLPGTS PLIGSNWESP VEMASGASTW EVLGGEENQD WVGIDESEYA  240
LAALSSSPIS ATTREIHGDN LVKEDLERGA PI
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G33710.11e-27ERF family protein