PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90127.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 226aa    MW: 24612.5 Da    PI: 5.2987
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90127.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.34e-183382255
         AP2  2 gykGVrwdkkrgrWvAeIrdpsengkrkrfslgkfgtaeeAakaaiaarkkleg 55
                +ykGVr ++ +g+Wv+eIr p   ++++r++lg++ t+e Aa+a++aa ++l+g
  RWR90127.1 33 QYKGVRMRS-WGSWVSEIRAP---NQKTRIWLGSYSTPEAAARAYDAALLCLKG 82
                7*****998.**********9...336************************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 226 aa     Download sequence    
MVKNNKVGSL QANVLGEKEQ QNLHKSMASR KKQYKGVRMR SWGSWVSEIR APNQKTRIWL  60
GSYSTPEAAA RAYDAALLCL KGSSANLNFP ITPSTFIPTT LMSPKSIQRV AAAAANATTP  120
SSSTSPSPST PSTSPPSPPP SSPSSSSSSS SPPSSPLDYQ DELFTSSWAN YTACEVEEPV  180
NQWYDFGEAF SPKYMDEMIN ACTFLAPPPL LEEFDEEGDI HLWSFC
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G77640.12e-30ERF family protein