PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90157.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 284aa    MW: 30904.7 Da    PI: 6.0456
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90157.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA48.99e-16741135
        GATA  1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35
                C +Cg+t+TplWR+gp g++ LCnaCG ++r kg+
  RWR90157.1  7 CCHCGVTSTPLWRNGPPGKPVLCNACGSRWRTKGT 41
                99******************************997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 284 aa     Download sequence    
MGKQGPCCHC GVTSTPLWRN GPPGKPVLCN ACGSRWRTKG TLANYAPLHS LGFVPVDSDE  60
SKYSCDYKSP LKKRLQVLNT RTQNEHSAEI GESVSRYGPS IKGFEDFTSN RSSSGSVISL  120
SESCVQLGGM DGNVISGSTQ TYLWDSQVPS RKRSGNKRKS PSPVEKLRRD LYDILHGQET  180
LYLSGSSDEV LLYEKEEDPM VSVEIGLGIV FIKQPVSSAE VESEANPLAL ESKISCLNDA  240
YMESLSFRVQ SSAGGKYKEI LDVGEGEVTM ENSTNHCVLS TSSL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G17570.32e-51GATA family protein