PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90198.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 578aa MW: 65609.9 Da PI: 5.5044

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90198.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	145.9	2.2e-45	147	273	3	129
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp..kkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 +GfrFhPtd elv++yLk+kv g ++++ evi+e+d+yk+ePwdLp +++k+++ w+fF++ dkky tg rk+r + g+Wk tg+d++++ +++ RWR90198.1 147 KGFRFHPTDVELVMYYLKRKVLGIQFPF-EVISEIDLYKFEPWDLPgmSCLKSGDLVWFFFCSPDKKYGTGLRKKRDNDIGFWKVTGNDTPIFY-DSRI 243 7*************************.99***********6448888999***********************************.999 PP NAM 100 vglkktLvfykgrapkgektdWvmheyrle 129 vg+k++Lvf++g+a +g +tdWvmheyrle RWR90198.1 244 VGMKRSLVFHRGKAGRGDRTDWVMHEYRLE 273 ****************************85 PP

Sequence ? help Back to Top
Protein Sequence Length: 578 aa Download sequence
MGKPIQPNAD KNVEVSSELQ TPSYPIPPTR PIHVSVKRTV EIKVTRWKHA TNRGASSRLK 60 TAETRAEQTR LSLSLYLYLF YIFSFGLISR SSTRARVSPA RQMSLYLSNK YLYFVRCDFC 120 FLDRDRKHSD YLHRLQKNLI LGFKHFKGFR FHPTDVELVM YYLKRKVLGI QFPFEVISEI 180 DLYKFEPWDL PGMSCLKSGD LVWFFFCSPD KKYGTGLRKK RDNDIGFWKV TGNDTPIFYD 240 SRIVGMKRSL VFHRGKAGRG DRTDWVMHEY RLEDEVLSDA SISQDAFVLC KIFEKSGRGS 300 KNGEQYGAPF KEEDWSDDDD GDGNYSLMPI PCAGTISPSP RPEDEEMILS ALKSGNGCNS 360 LVQPLPQQSM TPVVTEQHPS SVEHDDIHEL FLNVTDEDGD TLTSNRVSVD KKVDSAVPNK 420 SIVQDAEDHE IFKGLEDITG NVELNFNELD CPNENMQYQR LSRFSEGLYL EELQDPMEVE 480 GAYLEFKDLC HPMEPNFPGH GRSDYLFAHH GTPVLPDLGA RDSLGGSWEG QEPTYGSAAF 540 STLSAEVGGI YTPQSLARGG FIDPQCHNCV ENPQFLTP

Sequence ? help Back to Top

Protein Sequence Length: 578 aa Download sequence

MGKPIQPNAD KNVEVSSELQ TPSYPIPPTR PIHVSVKRTV EIKVTRWKHA TNRGASSRLK  60
TAETRAEQTR LSLSLYLYLF YIFSFGLISR SSTRARVSPA RQMSLYLSNK YLYFVRCDFC  120
FLDRDRKHSD YLHRLQKNLI LGFKHFKGFR FHPTDVELVM YYLKRKVLGI QFPFEVISEI  180
DLYKFEPWDL PGMSCLKSGD LVWFFFCSPD KKYGTGLRKK RDNDIGFWKV TGNDTPIFYD  240
SRIVGMKRSL VFHRGKAGRG DRTDWVMHEY RLEDEVLSDA SISQDAFVLC KIFEKSGRGS  300
KNGEQYGAPF KEEDWSDDDD GDGNYSLMPI PCAGTISPSP RPEDEEMILS ALKSGNGCNS  360
LVQPLPQQSM TPVVTEQHPS SVEHDDIHEL FLNVTDEDGD TLTSNRVSVD KKVDSAVPNK  420
SIVQDAEDHE IFKGLEDITG NVELNFNELD CPNENMQYQR LSRFSEGLYL EELQDPMEVE  480
GAYLEFKDLC HPMEPNFPGH GRSDYLFAHH GTPVLPDLGA RDSLGGSWEG QEPTYGSAAF  540
STLSAEVGGI YTPQSLARGG FIDPQCHNCV ENPQFLTP

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G64060.1	3e-71	NAC family protein