PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90217.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family NAC
Protein Properties Length: 185aa    MW: 21158.8 Da    PI: 4.8922
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90217.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM125.54.5e-3981251128
         NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgel 99 
                 lppGfrFhPtdeelvv++L  kv+  +++  ++i++vd+y+++Pw+L+ k+ ++++++yfFs+          ++r+  +gyWk+ g d +++s  +++
  RWR90217.1   8 LPPGFRFHPTDEELVVHFLYSKVALLPCHP-DIIPDVDLYRYDPWELNGKALSGDNQLYFFSHIT--------QERISPNGYWKHLGVDDPITS-ASQT 96 
                 79*************************999.99**************98788899*******975........478999***************.999* PP

         NAM 100 vglkktLvfykgrapkgektdWvmheyrl 128
                 vg kk Lvfy g+ap g kt+Wvmhey+l
  RWR90217.1  97 VGFKKFLVFYIGEAPVGIKTNWVMHEYHL 125
                 ***************************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 185 aa     Download sequence    
MGEDRFNLPP GFRFHPTDEE LVVHFLYSKV ALLPCHPDII PDVDLYRYDP WELNGKALSG  60
DNQLYFFSHI TQERISPNGY WKHLGVDDPI TSASQTVGFK KFLVFYIGEA PVGIKTNWVM  120
HEYHLLDGAT TSRSSRRRGK PRIASNEWVL CRVHESNCGD DGIELSCLDE VFLSMDDLDE  180
ISLPN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G64530.12e-70NAC family protein