PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90275.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

DBB

Protein Properties

Length: 188aa MW: 20590.3 Da PI: 6.6833

Description

DBB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90275.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-B_box	19.8	1.6e-06	4	46	5	41
zf-B_box 5 kCpeHeekelqlfCedCqqllCedClleeHkg......Htvvp 41 C+ +e+ e+ C ++ lC dC ++ H H++ p RWR90275.1 4 QCDVCERAEALVLCCADEAALCWDCDQKVHAAnklagkHQRLP 46 7****9********************6678888888877 PP
2	zf-B_box	31.7	3.2e-10	52	86	1	35
zf-B_box 1 seerkCpeHeekelqlfCedCqqllCedClleeHk 35 s+++kC+ ++ek +fC +++ l+C++C +++H RWR90275.1 52 SQAPKCDICQEKSGYFFCLEDRALFCRQCDVSIHT 86 5889****************************993 PP

Sequence ? help Back to Top
Protein Sequence Length: 188 aa Download sequence
MKIQCDVCER AEALVLCCAD EAALCWDCDQ KVHAANKLAG KHQRLPLSHP SSQAPKCDIC 60 QEKSGYFFCL EDRALFCRQC DVSIHTVSPY VSSHQRFLVT GVRVAPQQHS NMTAPDLLNC 120 STSSASSVEV PNKKCPILSS AGVTTSIHTG EQMVGLRPHW PLDEILTNAE YNSSYGFSEL 180 GSSRISSQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G78600.1	9e-62	DBB family protein