PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90278.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 266aa    MW: 29497.5 Da    PI: 8.1121
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90278.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.66.2e-3365121259
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                  + vrY+eClkNhAa++Gg+a+DGCgEfmps geegt +alkC+AC+CHRnFHR+e e 
   RWR90278.1  65 KVVRYRECLKNHAAAMGGNATDGCGEFMPS-GEEGTLEALKCSACNCHRNFHRKEIEG 121
                  679**************************9.999********************9876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    
MDISGPEADI PMPISSSYAG CHGHGYGQRV LDTTSHNHIF PPTFPPLPSN GSLSPDPEDH  60
IPYKKVVRYR ECLKNHAAAM GGNATDGCGE FMPSGEEGTL EALKCSACNC HRNFHRKEIE  120
GEPPSCECYC SNPKARKLVG QKGVLITNSE AFGYPTGSLM TRPQPPPHVL MSYNSIGLPS  180
ESDEQEGDAP KARPPLVKKR FRTKFTQEQK EKMLSFAEKV GWKIQKQEES VVQQFCQEIG  240
VKRRVLKVWM HNNKHNLAMK SSTSAD
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G14440.12e-70ZF-HD family protein