PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90321.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

FAR1

Protein Properties

Length: 683aa MW: 78857.8 Da PI: 7.3248

Description

FAR1 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90321.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	FAR1	66	9.7e-21	69	162	1	90
FAR1 1 kfYneYAkevGFsvrkskskks.krngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkek...dgkwevtkleleHnHela 90 +fY+e+Ak++GFs+r+++++ + + t+r fvC + g++ + ++++k +r+r+++r+gC+a l+++k+ ++w+vt + ++HnHel RWR90321.1 69 EFYSEFAKRCGFSIRRHRTEGKdGVGKGLTRRYFVCHRAGNTPVKASNESKPQRNRKSSRCGCQAYLRITKTMdmgVSEWRVTGFANHHNHELL 162 6************9998877356667999***********99999**************9988677899***********96 PP

Sequence ? help Back to Top
Protein Sequence Length: 683 aa Download sequence
MNIPMEEALE ARQMIEAYDD PSDQRSYSLD DTSSNDESPE EETRLSLETS NDAVPYIGQR 60 FVTHDAAYEF YSEFAKRCGF SIRRHRTEGK DGVGKGLTRR YFVCHRAGNT PVKASNESKP 120 QRNRKSSRCG CQAYLRITKT MDMGVSEWRV TGFANHHNHE LLEPNQVRFL PAYRTISESD 180 KNRIFMFAKT GISVQQMMRL MELEKCVEPG YLPFTEKDVR NLLQSFRKVD QDDEGIDLLR 240 MCKNIKDKDP NFRYEFTIDA NNRLENIAWS YASSIQAYEV FGDAVVFDTT HRLAAFDMPL 300 GIWVGMNNYG MPCFFGCALL REENTLSFSW ALKAFLGFMN GKAPLTILTD QNMCLKEAIA 360 IEMPSTTHAL CIWMIVAKFP SWFNAVLGER YNEWKAEFYR LYNLETKEDF ELGWRDMINF 420 FGLHTNRHIN NLFALRTLWA LPYLRRHFFA GMTTTGQSKS INAFIQRFLS AQTRLAHFVE 480 QVAVAVDFKD QAGEQQTMQQ NLQNISLKTG APMESHAATV LTPYAFCKLQ EELVLAAHYA 540 SFQVEDFFHV RHHTKIDGGR RVHWIPQKEH LSCSCYQFEF SGILCRHALR VLSTINCFQI 600 PDQYLPIRWR RVNALPAKLI VTPNEHSERV HAFQSMVSTL ITESTKSKER LDIATEQIST 660 LLSQIREVPV SAQGMRDIIH RSN

Sequence ? help Back to Top

Protein Sequence Length: 683 aa Download sequence

MNIPMEEALE ARQMIEAYDD PSDQRSYSLD DTSSNDESPE EETRLSLETS NDAVPYIGQR  60
FVTHDAAYEF YSEFAKRCGF SIRRHRTEGK DGVGKGLTRR YFVCHRAGNT PVKASNESKP  120
QRNRKSSRCG CQAYLRITKT MDMGVSEWRV TGFANHHNHE LLEPNQVRFL PAYRTISESD  180
KNRIFMFAKT GISVQQMMRL MELEKCVEPG YLPFTEKDVR NLLQSFRKVD QDDEGIDLLR  240
MCKNIKDKDP NFRYEFTIDA NNRLENIAWS YASSIQAYEV FGDAVVFDTT HRLAAFDMPL  300
GIWVGMNNYG MPCFFGCALL REENTLSFSW ALKAFLGFMN GKAPLTILTD QNMCLKEAIA  360
IEMPSTTHAL CIWMIVAKFP SWFNAVLGER YNEWKAEFYR LYNLETKEDF ELGWRDMINF  420
FGLHTNRHIN NLFALRTLWA LPYLRRHFFA GMTTTGQSKS INAFIQRFLS AQTRLAHFVE  480
QVAVAVDFKD QAGEQQTMQQ NLQNISLKTG APMESHAATV LTPYAFCKLQ EELVLAAHYA  540
SFQVEDFFHV RHHTKIDGGR RVHWIPQKEH LSCSCYQFEF SGILCRHALR VLSTINCFQI  600
PDQYLPIRWR RVNALPAKLI VTPNEHSERV HAFQSMVSTL ITESTKSKER LDIATEQIST  660
LLSQIREVPV SAQGMRDIIH RSN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10240.1	0.0	FAR1 family protein