PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90391.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 292aa    MW: 31175.6 Da    PI: 6.8057
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90391.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding40.46.6e-13122166347
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +WT++E+ l++ +  ++G+g+W++I+r +   Rt+ q+ s+ qky
       RWR90391.1 122 AWTEDEHRLFLLGLDKYGKGDWRSISRNFVVSRTPTQVASHAQKY 166
                      6*******************************************9 PP
Sequence ? help Back to Top
Protein Sequence    Length: 292 aa     Download sequence    
MTTEETSNGS SWTWEQDKEF EIAIATNAED SSDWWEKIAA AVPGKTIDEI KHHYELLVED  60
INSIESGHVP LPAYVSSSEG SGDPGSEGGM GRRGAHVGNH QGDSNQGGRA SRADQERRKG  120
IAWTEDEHRL FLLGLDKYGK GDWRSISRNF VVSRTPTQVA SHAQKYFIRL NSMNKDRRRS  180
SIHDITSVGN ADVAMPQAPI TGQSNGPVVA AGKSVKQSSQ PPPGVSGVSM YGSTTIGQPI  240
GGHLVPAVGT PVPTPPHMAY GIHAAVAGTV VPGAPVNIPP MTYPMPHTSA QR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G08520.11e-101MYB family protein