PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90405.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TCP

Protein Properties

Length: 243aa MW: 25848.1 Da PI: 9.847

Description

TCP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90405.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	TCP	123.8	1.9e-38	42	128	2	85
TCP 2 agkkdrhskihTkvggRdRRvRlsaecaarfFdLqdeLGfdkdsktieWLlqqakpaikeltgtssssasec...eaesssssasns 85 a+kk +++++h+kv+gR+RR+R+++ caar+F+L++eLG+++d++tieWLl+qa+p+i+++tg+++++a+++ ++ss ss +++ RWR90405.1 42 AVKKPPTKDRHSKVDGRGRRIRMPIICAARVFQLTRELGHKSDGQTIEWLLRQAEPSIIAATGSGTTPATFSdslRHHSSTSSLDHK 128 78*******************************************************************777556566666655544 PP

Sequence ? help Back to Top
Protein Sequence Length: 243 aa Download sequence
MSDGIDNGTL TVVMENQRHH QQELQLQTVP PPPSNTSGAA LAVKKPPTKD RHSKVDGRGR 60 RIRMPIICAA RVFQLTRELG HKSDGQTIEW LLRQAEPSII AATGSGTTPA TFSDSLRHHS 120 STSSLDHKPL PTAPFILGKR FRSDDDDGGS ATGLGVGIVS APAAGFWALP ARPDFGQVWS 180 FAAPEIVVPP QQPAVSGRFM PSVGEASAAR VGNYLPIAQG HLNFLASLSG AQAASGRRED 240 EPR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G23280.1	4e-73	TCP family protein