PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90468.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 230aa    MW: 25545 Da    PI: 6.1511
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90468.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH314.6e-1068115454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RR+r+N++f eL ++l +    + +K +Ka+iL  A + + +L
  RWR90468.1  68 SKACREKMRRERLNDRFVELSSVLEPG---RPPKSDKAMILSDAARVLVQL 115
                 6789**********************8...89************9887666 PP
Sequence ? help Back to Top
Protein Sequence    Length: 230 aa     Download sequence    
MGTNPISDYD WIDEVGGTDG DLRWTLDGFG DLPNPCVDIG DPYKDFCVLE QGDARKRARD  60
ESVTAPKSKA CREKMRRERL NDRFVELSSV LEPGRPPKSD KAMILSDAAR VLVQLRSEAQ  120
QLKETNEKLQ ATIKDLKAEK NELRGEKIKL KEDKERLEQH MKAMTMPPPA YMPHLAPFHA  180
AAAAAFAAQG QAAVNKAAMY PGYPGVAMWQ WAPPADVDTS QDHKLQSPAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.11e-58bHLH family protein