PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90517.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 232aa MW: 26522.5 Da PI: 4.6521

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90517.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	174.1	4.1e-54	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.k.kvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkg 97 lppGfrFhPtdeelv++yLk+k++g k+el ++i+e+d+yk+ePw+L k + +++ ewyfF +rd+ky++g r+nrat++gyWk+tgkd++v++ ++ RWR90517.1 6 LPPGFRFHPTDEELVSYYLKRKIQGLKIEL-DIIPEIDLYKCEPWELAdKsFLPSRDPEWYFFGPRDRKYPNGFRTNRATHAGYWKSTGKDRRVVC-QN 102 79**************************.99**********85335566888**********************************.77 PP NAM 98 elvglkktLvfykgrapkgektdWvmheyrl 128 ++g+kktLv+y+grap+g +tdWvmheyrl RWR90517.1 103 GTTGMKKTLVYYRGRAPQGIRTDWVMHEYRL 133 89*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 232 aa Download sequence
MAPVGLPPGF RFHPTDEELV SYYLKRKIQG LKIELDIIPE IDLYKCEPWE LADKSFLPSR 60 DPEWYFFGPR DRKYPNGFRT NRATHAGYWK STGKDRRVVC QNGTTGMKKT LVYYRGRAPQ 120 GIRTDWVMHE YRLDDKDCEE TFRIQDSYAL CRVFNKNGAC TEIEEQGQCS SQGIANDADT 180 MSPELPTGSS TCVDEDDDKD DSWMQFIRED AWCSSNVSTG SGDDSSCIAL TN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G17730.1	1e-120	NAC family protein