PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR90546.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family MYB_related
Protein Properties Length: 135aa    MW: 15580.5 Da    PI: 4.1432
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR90546.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding36.98.3e-1273118346
                      SS-HHHHHHHHHHHHHTTTT...-HHHHHHHHTTTS-HHHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGgg...tWktIartmgkgRtlkqcksrwqk 46 
                       WT+ Ed+l+    + +G +   +W++Ia++++ g+t  q+ ++++ 
       RWR90546.1  73 EWTKAEDKLFETTLAIYGEDtpdQWEKIAKELP-GKTTQQVEEHYRL 118
                      7********************************.***********96 PP
Sequence ? help Back to Top
Protein Sequence    Length: 135 aa     Download sequence    
MPSWWRALLL THSARDQRPA MGEHKIDSVL VVWNMVEDAI GAQYKGYYDG FDFVIPDLSS  60
SPFFDDPFFP VDEWTKAEDK LFETTLAIYG EDTPDQWEKI AKELPGKTTQ QVEEHYRLLV  120
KDVENIESVL DPVPS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G75250.26e-18MYB_related family protein