PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR90604.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 255aa MW: 29565.2 Da PI: 4.8338

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR90604.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	112.7	4.1e-35	11	125	3	128
NAM 3 pGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskkgelvg 101 pGfrFhPt+eel+++yLk ++gk+l+ vi ++++y+++Pw+Lp ++ +e+ewyf ++rd+k+++g r+nr+t++g+Wkatg+d+++ s RWR90604.1 11 PGFRFHPTEEELLDFYLKGALHGKNLSS-GVIGTLNLYRHDPWELPGLATIGEREWYFLVPRDRKHSNGGRPNRTTENGFWKATGSDRSIRS------- 101 9**********************999.99***********8777899*********************************99....... PP NAM 102 lkktLvfykgrapkgektdWvmheyrl 128 +k+ +grap+g +tdWvm+eyr+ RWR90604.1 102 MKDP---KRGRAPRGCRTDWVMNEYRM 125 4443...479*************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 255 aa Download sequence
MEKSTSELEL PGFRFHPTEE ELLDFYLKGA LHGKNLSSGV IGTLNLYRHD PWELPGLATI 60 GEREWYFLVP RDRKHSNGGR PNRTTENGFW KATGSDRSIR SMKDPKRGRA PRGCRTDWVM 120 NEYRMPDTCP IPKEDIVLCK IYRKATSLKV LEQRAAMEED TRMSQISTSA TDSASSPEEE 180 SWEMTMPLID EVLEENKIEI ERESENSSAQ LEDSAKESLP QLQLPKYNLE WMQDPFLLRS 240 PWLENWTTYS NLLNF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT2G17040.1	8e-90	NAC family protein