PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91072.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

TALE

Protein Properties

Length: 484aa MW: 52899.6 Da PI: 6.0068

Description

TALE family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91072.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Homeobox	22.3	2.2e-07	422	454	22	54
SSS--HHHHHHHHHHCTS-HHHHHHHHHHHHHH CS Homeobox 22 nrypsaeereeLAkklgLterqVkvWFqNrRak 54 +yp++e++++L +++gL+ +q+ +WF N+R + RWR91072.1 422 WPYPTEEDKARLVQETGLQLKQINNWFINQRKR 454 59*****************************87 PP
2	ELK	28.6	3.2e-10	375	396	1	22
ELK 1 ELKhqLlrKYsgyLgsLkqEFs 22 ELKh+L+++Y+++++++++E++ RWR91072.1 375 ELKHELKQGYKEKIVDIREEIL 396 9*******************97 PP

Sequence ? help Back to Top
Protein Sequence Length: 484 aa Download sequence
MYQNHLPHEM ALSHFGEQHL GESPSVLRGI LSEQLGQGSS DSAAAAKESK DFHHQRLMME 60 TSGKQSQAQL GGGGGGGATG PTWLNSAILR QQSQYADGSF LHLQTTSDST ASPSSVGGNP 120 WMHRPILQRN SSDVAGSGGD DVPVSSDSMI AAAGISHGSA ELNNGGGGGR NQVAASSGEL 180 QENDAAAASG RRGVGDEEEE MARWQAARHK ADILAHPLYE QLLSAHVACL RIATPVDQLP 240 RIDAQLAQSQ HVVAKYSVLG QGNQLLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM 300 EAVMACWELE QSLQSLTGVS PGEGTGATMS DDDDEQADSE TNLYDGSFDG PDSMGFGPLI 360 PTESERSLME RVRQELKHEL KQGYKEKIVD IREEILRKRR AGKLPGDTTS LLKAWWQSHS 420 KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHTNP SSSTVMKSKR KRSNAGDNNA 480 DRFM

Sequence ? help Back to Top

Protein Sequence Length: 484 aa Download sequence

MYQNHLPHEM ALSHFGEQHL GESPSVLRGI LSEQLGQGSS DSAAAAKESK DFHHQRLMME  60
TSGKQSQAQL GGGGGGGATG PTWLNSAILR QQSQYADGSF LHLQTTSDST ASPSSVGGNP  120
WMHRPILQRN SSDVAGSGGD DVPVSSDSMI AAAGISHGSA ELNNGGGGGR NQVAASSGEL  180
QENDAAAASG RRGVGDEEEE MARWQAARHK ADILAHPLYE QLLSAHVACL RIATPVDQLP  240
RIDAQLAQSQ HVVAKYSVLG QGNQLLVGDD KELDQFMTHY VLLLCSFKEQ LQQHVRVHAM  300
EAVMACWELE QSLQSLTGVS PGEGTGATMS DDDDEQADSE TNLYDGSFDG PDSMGFGPLI  360
PTESERSLME RVRQELKHEL KQGYKEKIVD IREEILRKRR AGKLPGDTTS LLKAWWQSHS  420
KWPYPTEEDK ARLVQETGLQ LKQINNWFIN QRKRNWHTNP SSSTVMKSKR KRSNAGDNNA  480
DRFM

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	452	472	RKRNWHTNPSSSTVMKSKRKR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G25220.1	0.0	TALE family protein