PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91113.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ARR-B
Protein Properties Length: 746aa    MW: 81154.6 Da    PI: 5.7629
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91113.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.84.9e-28215268155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr++W+ +LH++Fv+av+qL G +kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  RWR91113.1 215 KPRVVWSVDLHRKFVSAVNQL-GLDKAVPKRILDLMNVEKLTRENVASHLQKYRL 268
                 79*******************.********************************8 PP
2Myb_DNA-binding361.6e-11217267148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ +++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
       RWR91113.1 217 RVVWSVDLHRKFVSAVNQLGLDkaVPKRILDLMNvEKLTRENVASHLQKYR 267
                      678********************************99*************7 PP
3Response_reg79.98.7e-27261341109
                   EEEESSSHHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTES CS
  Response_reg   1 vlivdDeplvrellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGak 95 
                   vl vdD+p+ ++ll+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++ + + + +  Ga 
    RWR91113.1  26 VLAVDDDPTCLKLLENLLRRCDY-HVTATNQAVTALRMLRENKdkYDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDTSAVMKGITHGAC 120
                   799********************.***************888889*******************87754.558************************ PP

                   EEEESS--HHHHHH CS
  Response_reg  96 dflsKpfdpeelvk 109
                   d+l Kp+ +eel +
    RWR91113.1 121 DYLLKPVRIEELKN 134
                   ***********987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 746 aa     Download sequence    
MTVEDMRVSV GEEDASNDRF PVGMRVLAVD DDPTCLKLLE NLLRRCDYHV TATNQAVTAL  60
RMLRENKDKY DLVISDVHMP DMDGFKLLEL VGLEMDLPVI MLSANSDTSA VMKGITHGAC  120
DYLLKPVRIE ELKNIWQHVI RRRKIDSKYH NNSGRGHNVE KLDDGTGEGG EAHSTTPGDL  180
SGKPSRKRKD QNDDDDDDEC EENGQCNEDP SSQKKPRVVW SVDLHRKFVS AVNQLGLDKA  240
VPKRILDLMN VEKLTRENVA SHLQKYRLYL KRISNVASQQ ANFAAALGGR DLSYLQMGTL  300
DGIGDFHALS GSGQLPKTAL SSFQGGGPLG RLNSPSGLAL RGLSTSGMLQ LGRAQNAANS  360
ISDLGKLQRG SLNGTQHVNL LQGMPHSLEL DQLQQNGPVS HRGELSSPLN NSTVFSVTQQ  420
LTGVAGFPDT GVVNGNNSAS FLNVPNNPLL LHGQQQSMLS GGLGNQTSVR MAPMNPEPFD  480
MSVGVSSNLP DLRRCNDTWQ NAVPSSGYTA NPLSMGSSFN RDNSSSGDLR DNISSIASSH  540
IDMNSLNVSP SSVVPAPLHD SMSRRDPHSQ VSTFGVNIQS GSCEIDQNSK LSTFGSMNNA  600
VGQNMGYASK HKLEEHKQGY VHNSNLILDS DLSSMLSNNG VMSTLSQNSG QTNPFCYKKT  660
DMTAMDQMVS SAAYQMQNEI DKSTDGSVKL NEEYHLEHAK LQGGFNSNYC GSFDDLMSAI  720
IKRERDEVAL PDGDIGCDVY SLSTCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-130ARR-B family protein