PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91114.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ARR-B
Protein Properties Length: 733aa    MW: 79881.7 Da    PI: 6.3593
Description ARR-B family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91114.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1G2-like88.84.8e-28202255155
     G2-like   1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 
                 kpr++W+ +LH++Fv+av+qL G +kA+Pk+il+lm+v+ Lt+e+v+SHLQkYRl
  RWR91114.1 202 KPRVVWSVDLHRKFVSAVNQL-GLDKAVPKRILDLMNVEKLTRENVASHLQKYRL 255
                 79*******************.********************************8 PP
2Myb_DNA-binding361.6e-11204254148
                      TSSS-HHHHHHHHHHHHHTTTT..-HHHHHHHHT.TTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGgg..tWktIartmg.kgRtlkqcksrwqkyl 48 
                      r  W+ +++ ++v av+qlG +   +k+I   m+ +++t++++ s++qky+
       RWR91114.1 204 RVVWSVDLHRKFVSAVNQLGLDkaVPKRILDLMNvEKLTRENVASHLQKYR 254
                      678********************************99*************7 PP
3Response_reg678.5e-232312111109
                   HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHH..ESEEEEESSCTTSEHHHHHHHHHHHTTTSEEEEEESTTTHHHHHHHHHTTESEEEESS--HH CS
  Response_reg  11 rellrqalekegyeevaeaddgeealellkekd..pDlillDiempgmdGlellkeireeepklpiivvtahgeeedalealkaGakdflsKpfdpe 105
                   ++ll+++l++ +y +v+++ ++  al++l+e++  +Dl++ D+ mp+mdG++ll+     e++lp+i+++a+++ + + + +  Ga d+l Kp+ +e
    RWR91114.1  23 LKLLENLLRRCDY-HVTATNQAVTALRMLRENKdkYDLVISDVHMPDMDGFKLLELVGL-EMDLPVIMLSANSDTSAVMKGITHGACDYLLKPVRIE 117
                   7899*********.***************888889*******************87754.558********************************** PP

                   HHHH CS
  Response_reg 106 elvk 109
                   el +
    RWR91114.1 118 ELKN 121
                   *987 PP
Sequence ? help Back to Top
Protein Sequence    Length: 733 aa     Download sequence    
MLPTIGFRSV CVFLLWMMIL LALKLLENLL RRCDYHVTAT NQAVTALRML RENKDKYDLV  60
ISDVHMPDMD GFKLLELVGL EMDLPVIMLS ANSDTSAVMK GITHGACDYL LKPVRIEELK  120
NIWQHVIRRR KIDSKYHNNS GCGHNVEKLD DGTGEGGEAH STTPGDLSGK PSRKRKDQND  180
DDDDDECEEN GQCNEDPSSQ KKPRVVWSVD LHRKFVSAVN QLGLDKAVPK RILDLMNVEK  240
LTRENVASHL QKYRLYLKRI SNVASQQANF AAALGGRDLS YLQMGTLDGI GDFHALSGSG  300
QLPKTALSSF QGGGPLGRLN SPSGLALRGL STSGMLQLGR AQNAANSISD LGKLQRGSLN  360
GTQHVNLLQG MPHSLELDQL QQNRPVSHRG ELSSPLNNST VFSVTQQLTG VAGFPDTGVV  420
NGNSSASFLN VPNNPLLLHG QQQSMLSGGL GNQTSVRMAP MNPEPFDMSV GVSSNLPDLR  480
RCNDTWQNAV PSSGYTANPL SMGSSFNRDN SSSGDLRDNI SSIASSHIDM NSLNVSPSSV  540
VPAPLHDSMS RRDPHSQVST FGVNIQSGSC EIDQNSKLST FGSMNNAVGQ NMGYASKHKL  600
EEHKQGYVHN PNLILDSDLS SMLSNNGVMS TLSQNSGQTN PFCYKKTDMT AMDQMVSSAA  660
YQMQNEIDKS TDGSVKLNEE YHLEHAKLQG GFNSNYCGSF DDLMSAIIKR ERDEVALPDG  720
DIGCDVYSLS TCL
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G25180.11e-113ARR-B family protein