PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91153.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB_related

Protein Properties

Length: 786aa MW: 87236.4 Da PI: 5.9699

Description

MYB_related family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91153.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	29.2	2.1e-09	721	775	2	47
SSS-HHHHHHHHHHHHHTTTT.....-HHHHHHHHT....TTS-HHHHHHHHHHH CS Myb_DNA-binding 2 grWTteEdellvdavkqlGgg.....tWktIartmg....kgRtlkqcksrwqky 47 + WT eE+ l++av+++ + W++I+ + k+Rt+ ++k++w++ RWR91153.1 721 LLWTSEEEAVLKEAVRKFSEPgqgslPWTKIMDFGNkvfhKTRTPGDLKDKWRNI 775 66******************************99***************96 PP

Sequence ? help Back to Top
Protein Sequence Length: 786 aa Download sequence
MAASLAWAWI IETLADFKPP NSHLLQALMS FAPDLSTDSC EIARERVSLR ILEEMLDLVP 60 ADGTDSIGTC SGGNVQIDVS ERAVDVLFKV TTSDLTRGVE LKHSLNQFIL KKRACLPKHA 120 LEQLKELILE GGHPSAPSLM ERSGLAKENR ANCLDSGRIP ADGVGEDETS KSLKAINNIV 180 EIPSLEQNLS TEVLENGNTN FQEGAYNQIS SSKLVDKDRE LLLADKVTSN GEKAHPVKLT 240 TQPPDDSGKM HLEAQQNGVH KTMHLQQDIR ESICVDEARE EGSEPSETSS RGFGDRNTNL 300 NYNLDDEMVA NEKCQFISSQ NIARRNSQAG NWTEQSCCIK CDEGGQLLIC SGSSCPMAVH 360 EDCLGSPASF EGTDFYCPFC SYTRANAAYR KAKQKIAIAR KALSSFMCRD LAHPKQQRQL 420 PEGAYNKESE AARNANCPDT IHANKQHREI IDNHISTRVI EYRQQEEASI HLSDNNLPCK 480 EAATSLDSER NGVPLVQEKE GTSITVDSNK HKTAVEPHHD VVVATFCSND YLPCKEVETS 540 VIMNRHDVSS IDVERNCVEI VKDSQCTGEG GHQQQKESPT LCNNDSLPCR EANTSFDSES 600 QNVIDEKEDA AEMVDNQQHM NGSTQQRRAE NGTNSNAGNI PCIQVDDSPA AEKRPRGKRK 660 HAMIQQTSDP ETPATQPSIN ALETARNQNA EDLSPNKRIK RRKAAKRYSN PLMPHSRRTK 720 LLWTSEEEAV LKEAVRKFSE PGQGSLPWTK IMDFGNKVFH KTRTPGDLKD KWRNIMIKEG 780 APRRKT

Sequence ? help Back to Top

Protein Sequence Length: 786 aa Download sequence

MAASLAWAWI IETLADFKPP NSHLLQALMS FAPDLSTDSC EIARERVSLR ILEEMLDLVP  60
ADGTDSIGTC SGGNVQIDVS ERAVDVLFKV TTSDLTRGVE LKHSLNQFIL KKRACLPKHA  120
LEQLKELILE GGHPSAPSLM ERSGLAKENR ANCLDSGRIP ADGVGEDETS KSLKAINNIV  180
EIPSLEQNLS TEVLENGNTN FQEGAYNQIS SSKLVDKDRE LLLADKVTSN GEKAHPVKLT  240
TQPPDDSGKM HLEAQQNGVH KTMHLQQDIR ESICVDEARE EGSEPSETSS RGFGDRNTNL  300
NYNLDDEMVA NEKCQFISSQ NIARRNSQAG NWTEQSCCIK CDEGGQLLIC SGSSCPMAVH  360
EDCLGSPASF EGTDFYCPFC SYTRANAAYR KAKQKIAIAR KALSSFMCRD LAHPKQQRQL  420
PEGAYNKESE AARNANCPDT IHANKQHREI IDNHISTRVI EYRQQEEASI HLSDNNLPCK  480
EAATSLDSER NGVPLVQEKE GTSITVDSNK HKTAVEPHHD VVVATFCSND YLPCKEVETS  540
VIMNRHDVSS IDVERNCVEI VKDSQCTGEG GHQQQKESPT LCNNDSLPCR EANTSFDSES  600
QNVIDEKEDA AEMVDNQQHM NGSTQQRRAE NGTNSNAGNI PCIQVDDSPA AEKRPRGKRK  660
HAMIQQTSDP ETPATQPSIN ALETARNQNA EDLSPNKRIK RRKAAKRYSN PLMPHSRRTK  720
LLWTSEEEAV LKEAVRKFSE PGQGSLPWTK IMDFGNKVFH KTRTPGDLKD KWRNIMIKEG  780
APRRKT

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G58340.2	2e-06	MYB_related family protein