PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91315.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family Trihelix
Protein Properties Length: 111aa    MW: 12893.8 Da    PI: 9.3503
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91315.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix40.28.9e-131641785
    trihelix 17 meerlrrgklkkplWeevskkmrergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdql 85
                me r+++++++++ W+e ++ ++++g++r  kqC+ekw++l  + k++ eg+++r  +   + pyf +l
  RWR91315.1  1 MEGRFEKAARRGAVWDELAEEISAEGVKRDGKQCREKWDKLMAELKEVSEGKRDR--R---ESPYFGEL 64
                78999************************************************97..3...34788765 PP
Sequence ? help Back to Top
Protein Sequence    Length: 111 aa     Download sequence    
MEGRFEKAAR RGAVWDELAE EISAEGVKRD GKQCREKWDK LMAELKEVSE GKRDRRESPY  60
FGELLGLVDI DHSVVFMTII LFRSLSEASE VRALRGCHRF GLRRHSSRPM R
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G03680.15e-09Trihelix family protein