PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91484.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

LBD

Protein Properties

Length: 117aa MW: 13537.8 Da PI: 10.3793

Description

LBD family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91484.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	DUF260	127.6	5.7e-40	6	100	1	95
DUF260 1 aCaaCkvlrrkCakdCvlapyfpaeqpkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaela 95 +CaaCk+lrr+C++dC+++pyfp+++p++fa+vhk++Gasnv+k+l+++p + r +a++sl++eA++r++dP+yG+vg+i++lq+++ +++ e+ RWR91484.1 6 RCAACKFLRRRCPEDCIFSPYFPSTNPQRFACVHKIYGASNVSKMLQQIPVHLRANAADSLFFEAHMRIQDPIYGCVGIISRLQHEIYSSQREML 100 6****************************************************************************************999875 PP

Sequence ? help Back to Top
Protein Sequence Length: 117 aa Download sequence
MSSHSRCAAC KFLRRRCPED CIFSPYFPST NPQRFACVHK IYGASNVSKM LQQIPVHLRA 60 NAADSLFFEA HMRIQDPIYG CVGIISRLQH EIYSSQREML LRPRSLSTQP NRPKKLR

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G26660.1	1e-46	LBD family protein