PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91492.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 353aa    MW: 38222.6 Da    PI: 6.6781
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91492.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA55.86.4e-18263299135
        GATA   1 CsnCgttk..TplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 C++Cgt++  Tp++Rrgpdg++tLCnaCGl++  kg+
  RWR91492.1 263 CHHCGTSQkaTPMMRRGPDGPRTLCNACGLFWSNKGT 299
                 *********************************9997 PP
Sequence ? help Back to Top
Protein Sequence    Length: 353 aa     Download sequence    
MGENNSGNVD VKVQAVQAVQ VQGHPQIHLV SADHVHMLAA AAAMSMPGQM DGGQGGGGMA  60
EQMPVQVVDA QPIHVHYMQA HEEAMEEEPE DGGSDGMEGD GSAEQQQVVA VARSQTVNQL  120
TLSFQGEVYV FDSVPPEKVQ AVLLLLGGRE VPVTLPAFQS NQNNRELNDV SQNANMPQRV  180
ASLMRFREKR KERNFDKKVR YTVRKEVALR MHRHKGQFAS KAQIEEAQAQ EAAAKAAASA  240
SSWGDNTRWI PVHNETPPKA AACHHCGTSQ KATPMMRRGP DGPRTLCNAC GLFWSNKGTL  300
RDLSKNTHAQ AQAQIHQNPP RNVNNEIEAE AGANRGEDVV TMQANAANGH GTS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G21175.22e-78GATA family protein