PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91494.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 268aa    MW: 30596.2 Da    PI: 6.8001
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91494.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH443.9e-1482126554
                 HHHHHHHHHHHHHHHHHHHHCTSCC.C...TTS-STCHHHHHHHHHHHHHH CS
         HLH   5 hnerErrRRdriNsafeeLrellPk.askapskKlsKaeiLekAveYIksL 54 
                 + e Er+RR+++N++++ Lr+++Pk +      K++Ka+i + A++YI++L
  RWR91494.1  82 NIESERNRRKKLNERLFALRSIVPKiS------KMDKASIIKDAIDYIQEL 126
                 5689*********************66......****************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 268 aa     Download sequence    
MDESLPILSS DILVYRNRHR KAVTATIMDM ISEEYSWFWE TKMFFQNQEL ELESMAWDES  60
ISGCYYDGSS SPDGATSSSS KNIESERNRR KKLNERLFAL RSIVPKISKM DKASIIKDAI  120
DYIQELHDQE RKIKREITEL ELELESGNQK KTPKWDRAVK ENMTHSKLIK KKRTDELEGV  180
AATPVEVLDL SVSEMGEKAL IISITCSKKT DTMVKLCEAF ESLKLKIITA NITAFSGRLL  240
KTVFVEANGG EKDLLKEKIK VALKDMNA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G57150.16e-69bHLH family protein