PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91530.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

bZIP

Protein Properties

Length: 366aa MW: 40334.9 Da PI: 5.9024

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91530.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	51.1	2.9e-16	185	236	3	54
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 + +r rrk +NRe+ArrsR+RK+a ++ Le kv++L++e ++L k+l + ++ RWR91530.1 185 DQRRHRRKVSNRESARRSRKRKQAHLADLEVKVDQLKGEYSSLLKQLTTASQ 236 6789**************************************9988876555 PP

Sequence ? help Back to Top
Protein Sequence Length: 366 aa Download sequence
MRRILSDLFL DPLQWADMEE AAAIVAAEDE NRRSSNQEEE VEGVLGRIRA NDCFQDPTCS 60 DVTSDFPNHF HHNSSRITDT INSYGACEQM RTGIPWSLNL THHHPTKSAT MDSQSSVCGP 120 ASVCSGLTVG YAGSASAGSP NSPLKPKIMD IQARGATSGS SRERSDDDDL EIEAGQCEQS 180 TNICDQRRHR RKVSNRESAR RSRKRKQAHL ADLEVKVDQL KGEYSSLLKQ LTTASQQFGE 240 AFTDNRVLKS DVEALRMKVK MAEDMVARGS LTLNHLFQNH CGTSQPLVSC HAQSVGVHDI 300 GITEMLPVGS ESGETNNVNI RSKENHNGLL ERITSLEILQ QDRLLSDGVS CASDIPWDVY 360 VVPVTK

Sequence ? help Back to Top

Protein Sequence Length: 366 aa Download sequence

MRRILSDLFL DPLQWADMEE AAAIVAAEDE NRRSSNQEEE VEGVLGRIRA NDCFQDPTCS  60
DVTSDFPNHF HHNSSRITDT INSYGACEQM RTGIPWSLNL THHHPTKSAT MDSQSSVCGP  120
ASVCSGLTVG YAGSASAGSP NSPLKPKIMD IQARGATSGS SRERSDDDDL EIEAGQCEQS  180
TNICDQRRHR RKVSNRESAR RSRKRKQAHL ADLEVKVDQL KGEYSSLLKQ LTTASQQFGE  240
AFTDNRVLKS DVEALRMKVK MAEDMVARGS LTLNHLFQNH CGTSQPLVSC HAQSVGVHDI  300
GITEMLPVGS ESGETNNVNI RSKENHNGLL ERITSLEILQ QDRLLSDGVS CASDIPWDVY  360
VVPVTK

Nucleic Localization Signal ? help Back to Top

No.	Start	End	Sequence
1	190	206	RRKVSNRESARRSRKRK
2	200	206	RRSRKRK
3	200	207	RRSRKRKQ
4	202	207	SRKRKQ

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT5G24800.1	2e-40	bZIP family protein