PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91568.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

G2-like

Protein Properties

Length: 489aa MW: 54389.5 Da PI: 6.6619

Description

G2-like family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91568.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	G2-like	102.3	2.9e-32	265	319	1	55
G2-like 1 kprlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 k+rlrWtpeLHerF+ea+++LG +ekAtPk+il+lm+v+gLt++h+kSHLQkYRl RWR91568.1 265 KQRLRWTPELHERFIEAINKLGDAEKATPKSILKLMNVEGLTIYHIKSHLQKYRL 319 79****************************************************8 PP
2	Myb_DNA-binding	58.9	1.1e-18	267	318	1	48
TSSS-HHHHHHHHHHHHHTTTT...-HHHHHHHHT.TTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGgg...tWktIartmg.kgRtlkqcksrwqkyl 48 r+rWT+e++e++++a+++lG t+k+I + m+ +g+t +++ks++qky+ RWR91568.1 267 RLRWTPELHERFIEAINKLGDAekaTPKSILKLMNvEGLTIYHIKSHLQKYR 318 89****************88***************************7 PP

Sequence ? help Back to Top
Protein Sequence Length: 489 aa Download sequence
MDSHNIITDK KKDSCKEVAD TSAASSINNP VVAESNSRRL FGDSFSLAHP SFNVQTKLFN 60 SASSQREVHS HSKALSPESK PSSPVSHPQR PKQIFSRSSA FCTNLYFSSS TSSEAHRQLG 120 NLPFLPHPPK CNQPASAAHS LNSSSLLGVD IDYSWDEGNR SEDMMKGFLD LPGDASDGCF 180 SDESYSSKTL AFAEQLDLQI LSEELNIDIT GNLENPGLDE IYETPQFSSV PEVVSKYKTN 240 QHLVPPVGIP IHSRTSTSTP AAVNKQRLRW TPELHERFIE AINKLGDAEK ATPKSILKLM 300 NVEGLTIYHI KSHLQKYRLA KYLPETKEDK KTSSSEEKKL SPNSDEGDAC IKRSKQMTEA 360 LRMQIEVQKQ LHEQLEVQRA LQLRIEEHAR YLQRILEEQE KTSNRSFSNS GRQSSPSKQQ 420 NSEIQPAESS PAHASLQQAQ SKTDSTSPIS AEHKGTDSDR ESMPSALRKR ARLEVATPEI 480 APNEPIVEN

Sequence ? help Back to Top

Protein Sequence Length: 489 aa Download sequence

MDSHNIITDK KKDSCKEVAD TSAASSINNP VVAESNSRRL FGDSFSLAHP SFNVQTKLFN  60
SASSQREVHS HSKALSPESK PSSPVSHPQR PKQIFSRSSA FCTNLYFSSS TSSEAHRQLG  120
NLPFLPHPPK CNQPASAAHS LNSSSLLGVD IDYSWDEGNR SEDMMKGFLD LPGDASDGCF  180
SDESYSSKTL AFAEQLDLQI LSEELNIDIT GNLENPGLDE IYETPQFSSV PEVVSKYKTN  240
QHLVPPVGIP IHSRTSTSTP AAVNKQRLRW TPELHERFIE AINKLGDAEK ATPKSILKLM  300
NVEGLTIYHI KSHLQKYRLA KYLPETKEDK KTSSSEEKKL SPNSDEGDAC IKRSKQMTEA  360
LRMQIEVQKQ LHEQLEVQRA LQLRIEEHAR YLQRILEEQE KTSNRSFSNS GRQSSPSKQQ  420
NSEIQPAESS PAHASLQQAQ SKTDSTSPIS AEHKGTDSDR ESMPSALRKR ARLEVATPEI  480
APNEPIVEN

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G13040.1	1e-90	G2-like family protein