PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91646.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 213aa    MW: 23970.2 Da    PI: 8.3166
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91646.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH34.92.7e-1162109454
                 HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                 ++  rE+ RRd++N++f+ L ++l +    +  K +K++iL  A++ +++L
  RWR91646.1  62 SKACREKMRRDKMNDRFSDLCSILEPG---RPVKTDKSAILSDAIRVLNQL 109
                 6789**********************8...89****************999 PP
Sequence ? help Back to Top
Protein Sequence    Length: 213 aa     Download sequence    
MDSFQDNGWD LLDYNNIIQD NLCWSNQSSG VEFNASFAGS LSQENASARK RARNESCSRP  60
SSKACREKMR RDKMNDRFSD LCSILEPGRP VKTDKSAILS DAIRVLNQLR TEAKDLKEAN  120
EKLQEDIKVL KAEKNELREE KLRLKADKER MEQQVKAMTV LPVGLVPPHP AVYPTGVNKM  180
MAFHGYGGVP MWQFLSPAAL DTSQDTVLRP PAA
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G54680.12e-48bHLH family protein