PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91664.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family LBD
Protein Properties Length: 200aa    MW: 21754 Da    PI: 7.3371
Description LBD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91664.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1DUF260125.91.9e-3981081100
      DUF260   1 aCaaCkvlrrkCakdCvlapyfpaeq.pkkfanvhklFGasnvlkllkalpeeeredamsslvyeAearardPvyGavgvilklqqqleqlkaelallk 98 
                 +C aCk+lrrkCa+dC++apyf++eq p++fa++hk+FGasnv+kll ++p  er +a+ +++yeA+ar++dPvyG+v++i++lqqq+++l+a+l +l+
  RWR91664.1   8 PCGACKFLRRKCASDCIFAPYFCSEQgPARFAAIHKIFGASNVSKLLMHVPLAERCEAVVTIAYEAQARISDPVYGCVAHIFALQQQVASLQAQLMQLR 106
                 7*************************99*******************************************************************9988 PP

      DUF260  99 ee 100
                 ++
  RWR91664.1 107 AQ 108
                 76 PP
Sequence ? help Back to Top
Protein Sequence    Length: 200 aa     Download sequence    
MGTGAGSPCG ACKFLRRKCA SDCIFAPYFC SEQGPARFAA IHKIFGASNV SKLLMHVPLA  60
ERCEAVVTIA YEAQARISDP VYGCVAHIFA LQQQVASLQA QLMQLRAQVA QNSIDPRLLE  120
NYCPTNIMGG GGSMNLAYPN IHSMSPQSSI DSGDHSSSGP SMMQDVLYRE DVPLQPCIKR  180
RTPQDELNEL QALALTMMRN
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G42430.13e-53LBD family protein