PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR91672.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family C2H2
Protein Properties Length: 168aa    MW: 18922.8 Da    PI: 5.6035
Description C2H2 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR91672.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1zf-C2H215.26e-052749123
                EEETTTTEEESSHHHHHHHHHHT CS
     zf-C2H2  1 ykCpdCgksFsrksnLkrHirtH 23
                y+C+ C++ Fs+   L  H++ H
  RWR91672.1 27 YECTFCKRGFSTAQALGGHMNIH 49
                99*******************99 PP
Sequence ? help Back to Top
Protein Sequence    Length: 168 aa     Download sequence    
MEESRDSSDE SDRPEGVKDE TSTGRFYECT FCKRGFSTAQ ALGGHMNIHR RDRARMRQPS  60
LPSVPNRPGN EPPVPNSGFS PPQFPNYPFL PPLNYHHAYL PTSTSSSRHA QLFHGDDLSA  120
RVPPPPRQLS LFGEDLNPGP STQVRNREEK KEEDDSELDL ELRLGPEP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G53820.11e-15C2H2 family protein