PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91882.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 361aa MW: 40432.5 Da PI: 6.3143

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91882.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	53	7.8e-17	84	131	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g W++eEd++l ++v ++G g+W+t++ + g+ R +k+c++rw +yl RWR91882.1 84 KGLWSPEEDQRLRNYVLKYGHGCWSTVPTKAGLQRNGKSCRLRWINYL 131 678*******************************************97 PP
2	Myb_DNA-binding	55.2	1.6e-17	137	182	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg +T+eE+e ++ ++ +lG++ W+ Ia +++ gRt++++k++w++yl RWR91882.1 137 RGVFTPEEEETILGLHSLLGNK-WSQIAMHLP-GRTDNEIKNHWNSYL 182 899*****************.*****.***********97 PP

Sequence ? help Back to Top
Protein Sequence Length: 361 aa Download sequence
MDVETLCKGQ TTTTTPLSLR GSLAFKNPTL SIPNSAAEQA LFSNLERLQR LLSSVHIYWN 60 LPNRLPPDDM GCKKCDGQKP KYRKGLWSPE EDQRLRNYVL KYGHGCWSTV PTKAGLQRNG 120 KSCRLRWINY LRPGLKRGVF TPEEEETILG LHSLLGNKWS QIAMHLPGRT DNEIKNHWNS 180 YLKKKVIKME EFESNVNVNP LLNSTPKTIE STPLIREPNT NLSNLESLEQ LEGSIDTDQS 240 VPQASDCYSI KDTPKNPLPK LLFSEWLSID CFDPRNTTQS GNLPIDLTTS MANSNASNVD 300 GQYFGHGLAH VVGSSTGEFG VYGELASQFD PESQFFGGGI FDLLSNDEVY SNFSMTHDVV 360 L

Sequence ? help Back to Top

Protein Sequence Length: 361 aa Download sequence

MDVETLCKGQ TTTTTPLSLR GSLAFKNPTL SIPNSAAEQA LFSNLERLQR LLSSVHIYWN  60
LPNRLPPDDM GCKKCDGQKP KYRKGLWSPE EDQRLRNYVL KYGHGCWSTV PTKAGLQRNG  120
KSCRLRWINY LRPGLKRGVF TPEEEETILG LHSLLGNKWS QIAMHLPGRT DNEIKNHWNS  180
YLKKKVIKME EFESNVNVNP LLNSTPKTIE STPLIREPNT NLSNLESLEQ LEGSIDTDQS  240
VPQASDCYSI KDTPKNPLPK LLFSEWLSID CFDPRNTTQS GNLPIDLTTS MANSNASNVD  300
GQYFGHGLAH VVGSSTGEFG VYGELASQFD PESQFFGGGI FDLLSNDEVY SNFSMTHDVV  360
L

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT4G25560.1	3e-58	MYB family protein