PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR91885.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

MYB

Protein Properties

Length: 304aa MW: 33437.2 Da PI: 6.3664

Description

MYB family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR91885.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	Myb_DNA-binding	58.4	1.6e-18	14	61	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 +g+WT+eEde+l+d++k+ G g+W++ ++ g+ R++k+c++rw +yl RWR91885.1 14 KGPWTPEEDEILIDYIKKNGHGSWRSLPKQAGLSRCGKSCRLRWTNYL 61 79********************************************97 PP
2	Myb_DNA-binding	53.9	4.1e-17	67	112	1	48
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 rg++T eE++ ++++++ G++ W+tIa+ ++ gRt++++k++w+++l RWR91885.1 67 RGPFTLEEEKTIIQLHAIVGNR-WSTIASQLP-GRTDNEIKNFWNTHL 112 89******************.*****.**********996 PP

Sequence ? help Back to Top
Protein Sequence Length: 304 aa Download sequence
MGRAPCCEKQ GLKKGPWTPE EDEILIDYIK KNGHGSWRSL PKQAGLSRCG KSCRLRWTNY 60 LRPDIKRGPF TLEEEKTIIQ LHAIVGNRWS TIASQLPGRT DNEIKNFWNT HLKKRLERMG 120 QGSTTSNASS AGPTATSSTS TRHMAQWESA RLEAEARLSK ESLLFFSSQT DSASAQAAAA 180 AGRSDTDYFL RIWNSDVGES FRRLGRSCGR DEPTCLQSDN SISPASSSTL MAAVTATALT 240 ITSEQNEVVV KSSDDSSSSN ELEDEESHET SLSLLLDFPP SDEMGFFQGQ IGSRLMCGLP 300 LGQF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G61250.1	3e-93	MYB family protein