PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92107.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family B3
Protein Properties Length: 237aa    MW: 27287.2 Da    PI: 8.9421
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92107.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B350.15e-16120206187
                 EEEE-..-HHHHT...T-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SS CS
          B3   1 ffkvltpsdvlks...grlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgr 87 
                 f+k++++s+v++      + +p  f +eh  +ke+   l l d++gr Wev+++   ++++ +l++GW+e  +a++L++gD+++F+l+g+
  RWR92107.1 120 FLKTMKKSSVGNCftcFVMNVPSFFSREHL-PKEK-NILFLWDPKGRAWEVTFTPGINQNG-YLSGGWSECSRAHDLRVGDVCIFELVGT 206
                 899999999999876566799999999993.4434.489**************76666666.5999********************9985 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MVFYVIAFAT SACEKRIPVL RKDDKDDGKQ RGREDEKKIP LVLEEVKDKG KQRGQRVSTA  60
KINGFKKIRT EDVELPMYKT DSVGARHISK NQTSIAEDKR KENHLRKLML FQEAPKFPNF  120
LKTMKKSSVG NCFTCFVMNV PSFFSREHLP KEKNILFLWD PKGRAWEVTF TPGINQNGYL  180
SGGWSECSRA HDLRVGDVCI FELVGTDPYH TVETEDGQTF QAFELIGEPE WRARDGY
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G42700.11e-11B3 family protein