PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92286.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

C2H2

Protein Properties

Length: 412aa MW: 45356.3 Da PI: 8.9262

Description

C2H2 family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92286.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	zf-C2H2	14.7	9.1e-05	182	203	3	23
ETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 3 CpdCgksFsrksnLkrHirt.H 23 C+ Cg++F+ ++L H+ + H RWR92286.1 182 CSECGEVFTKAESLDAHQAVrH 203 ******************9888 PP

Sequence ? help Back to Top
Protein Sequence Length: 412 aa Download sequence
MLEKPPPSLL TFFLALLFMA LSSFLPTTST PQKHHQPSSK RKRKQQQQHH KTPSSWEQIK 60 GLLTCKQIEG SQVHDPSKNL VGYSKLSSSC NSICSFRDVV HGNTRVIHRE ENSPESSSVG 120 QETGLLRRNP ASTEPSRSIR SNGGYSSSSR GMHLRRLSGC YECHMIVDPS RFPSARTSIS 180 ACSECGEVFT KAESLDAHQA VRHAVSELGP DDSGRNIVEI IFKSSWLKKD RPIFKIERIL 240 KVHNTQRTIA RFEDYRDSVK ARASAHYDRC AADGNELLRF HCTTLTCALG ARGASTLCGS 300 QPTCGVCTII RHGFAGKEVR TTASSGRAHD CLHVAADEGR RAMLVCRVIA GRVRRVGSDD 360 SVPGEEESVL GQGGTYDSVV GHAGIYSNLE ELIVFNPRAI LSCFVVIYRS VD

Sequence ? help Back to Top

Protein Sequence Length: 412 aa Download sequence

MLEKPPPSLL TFFLALLFMA LSSFLPTTST PQKHHQPSSK RKRKQQQQHH KTPSSWEQIK  60
GLLTCKQIEG SQVHDPSKNL VGYSKLSSSC NSICSFRDVV HGNTRVIHRE ENSPESSSVG  120
QETGLLRRNP ASTEPSRSIR SNGGYSSSSR GMHLRRLSGC YECHMIVDPS RFPSARTSIS  180
ACSECGEVFT KAESLDAHQA VRHAVSELGP DDSGRNIVEI IFKSSWLKKD RPIFKIERIL  240
KVHNTQRTIA RFEDYRDSVK ARASAHYDRC AADGNELLRF HCTTLTCALG ARGASTLCGS  300
QPTCGVCTII RHGFAGKEVR TTASSGRAHD CLHVAADEGR RAMLVCRVIA GRVRRVGSDD  360
SVPGEEESVL GQGGTYDSVV GHAGIYSNLE ELIVFNPRAI LSCFVVIYRS VD

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G75710.1	1e-145	C2H2 family protein