PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92292.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 303aa    MW: 33457.5 Da    PI: 8.7853
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92292.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.14.3e-101059154
                CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                r++ +  rE+ RRdr+N+ f eL + l ++     +K++Ka+iL+ +v+ +k+L
  RWR92292.1 10 RKVQKADREKLRRDRLNEQFLELGKALDPD----RPKNDKATILTDTVQMLKDL 59
                5677889********************997....79****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 303 aa     Download sequence    
MEVKDSMTAR KVQKADREKL RRDRLNEQFL ELGKALDPDR PKNDKATILT DTVQMLKDLT  60
AQVNRLKAEY GSLSEESREL SQEKSELREE KAALKSDIDN LNVQYQQRLR VMFPWTGMDP  120
SVVMGPPTYS FPMPVPVPPG PIPMHPSLQP FPFFSSPNPG ALPNPCSTFL PYSSLGNPQM  180
EPPSTHYMPP HSLPTSRSQS ASKQDSRSKS SDRQRGSNVE KSIDSNDVVT ELELKTPGSS  240
LTTHLKSVPD QELSSEGRKG KHWSSPRKAS GVTDESCSSR CSSSRAPQDS SSNSVGDGSV  300
AKK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19860.15e-45bHLH family protein