PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92470.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 316aa    MW: 35348.8 Da    PI: 5.4688
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92470.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH41.13.1e-13122173155
                 CHHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
         HLH   1 rrrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                 +r++h ++Er+RR+++N+ ++ Lr+l+P++   + ++ + a+i   A++++k+L+
  RWR92470.1 122 QRMTHIAVERNRRKQMNEYLAVLRSLMPPS---YVQRGDQASIIGGAINFVKELE 173
                 79****************************...9******************995 PP
Sequence ? help Back to Top
Protein Sequence    Length: 316 aa     Download sequence    
MALETVVYAQ DLFSYGCKDL YSLAAALSYD FKAEEQDEEE EREGAVECGM SFPTVRNPEL  60
GRGLDVLHGN LKEWDANSSP EACTPDGLLS GNFPAPETTP APGRRKRRRA KSCKNKEEVE  120
NQRMTHIAVE RNRRKQMNEY LAVLRSLMPP SYVQRGDQAS IIGGAINFVK ELEQLLQSME  180
AHKRTTQQLN ASCSPPFADF FTYPQYSSRA NNCNPSSETS AENHSAIPEI EVNMVESHAN  240
LKVLTRRRPK QLLQMIAGFQ NLYLTILHLN VTTTDQMVLY SFSVKVEDNC TLTSVDEIAT  300
AVKQMVGRIQ GEGSLS
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1105109RKRRR
2123134RMTHIAVERNRR
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G72210.15e-83bHLH family protein