PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92481.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 237aa    MW: 25637.4 Da    PI: 7.9195
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92481.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer104.56.9e-3351106359
  ZF-HD_dimer   3 kvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRrevee 59 
                    rY+eClkNhA+ +GghavDGCgEfmp+ geegt +alkCaAC CHRnFHR+eve 
   RWR92481.1  51 VSRYRECLKNHAVGIGGHAVDGCGEFMPA-GEEGTLDALKCAACSCHRNFHRKEVEG 106
                  579*************************9.999*********************986 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MEFEDHEEQE EEMGMPGSAS YDTLANSSRP RMASAGGESA AAPSPAARRS VSRYRECLKN  60
HAVGIGGHAV DGCGEFMPAG EEGTLDALKC AACSCHRNFH RKEVEGEGYH HQFAQYYRAP  120
AGYLHVAQHH RPQPTLALPS TSGGGGQSRE DQEDVSNPSG GGGGGGGGGS SIGKKRFRTK  180
FTLEQKEKML AFAERVGWRI QKHDDAAVQQ FCTETGVKKH VLKVWMHNNK NTLGKKP
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G24660.13e-73ZF-HD family protein