PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92501.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 237aa    MW: 25591.9 Da    PI: 8.878
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92501.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH44.43e-144693254
                HHHHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH  2 rrahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54
                +++h+e+ErrRR+riN  +++Lr+llP+      +K +Ka+ L ++v+++++L
  RWR92501.1 46 CKSHSEAERRRRERINGHLATLRSLLPNT-----TKTDKASLLAEVVHHVREL 93
                789*************************9.....8***************998 PP
Sequence ? help Back to Top
Protein Sequence    Length: 237 aa     Download sequence    
MLPFQGYYGF GREQGLLQGL GLVEMDGEDS NLKSRSAAEM KQVAACKSHS EAERRRRERI  60
NGHLATLRSL LPNTTKTDKA SLLAEVVHHV RELKRHAADM TISDPTSGGG IWPFPGETDE  120
VTLDQDRQSS LIKASVCCDD RPELLSDLNV AIRSLRLRAV KAEMATLGGR TKSVFLIEGG  180
GGEEDLSSIR RALKAVIEKP AGGGGGGGGS SSASGSMVPE NKRLRFSRQL NLHHGFQ
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15358ERRRRE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G25710.16e-41bHLH family protein