PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92539.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family B3
Protein Properties Length: 220aa    MW: 25358 Da    PI: 9.8433
Description B3 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92539.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1B352.68.1e-17126216199
                 EEEE-..-HHHHTT-EE--HHH.HTT---..--SEEEEEETTS-EEEEEE..EEETTEEEE-TTHHHHHHHHT--TT-EEEEEE-SSSEE..EEEEE-S CS
          B3   1 ffkvltpsdvlksgrlvlpkkfaeehggkkeesktltledesgrsWevkliyrkksgryvltkGWkeFvkangLkegDfvvFkldgrsefelvvkvfrk 99 
                 f+k ++ s+v+   +l lp +f++++  +  ++ t+tl de+g +++  +  +k++    l++GW++F  a++L +gD +vF+l+++++f  +v ++r+
  RWR92539.1 126 FIKPMLISHVTGGFWLGLPVQFCKSYLPV--RDDTVTLVDEDGDEYQTVYLAQKTG----LSGGWRGFSLAHDLVDGDALVFQLVKNTTF--KVYIVRA 216
                 8999**********************634..6669***************444444....************************998888..8888876 PP
Sequence ? help Back to Top
Protein Sequence    Length: 220 aa     Download sequence    
MAVDEGSYED CRRKRLEENK KRMEELKLTQ LSQTLKNASP KPSPVKPGKP RTPRKEMIEV  60
EVRRSSRVAK RPAPDYKETV VYFERPRSYK RRDLLNRVYA SDKARFHAIE RANEVQSNLE  120
PEFPSFIKPM LISHVTGGFW LGLPVQFCKS YLPVRDDTVT LVDEDGDEYQ TVYLAQKTGL  180
SGGWRGFSLA HDLVDGDALV FQLVKNTTFK VYIVRANESK
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G19184.14e-74B3 family protein