PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92558.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ERF
Protein Properties Length: 219aa    MW: 24724.3 Da    PI: 10.6087
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92558.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP266.64.9e-21135185155
         AP2   1 sgykGVrwdkkrgrWvAeIrdpsengkr.krfslgkfgtaeeAakaaiaarkkleg 55 
                 ++y+GVr+++ +g+W+AeIrdp+    r +r++lg+f+taeeAa+a+++a+  ++g
  RWR92558.1 135 KKYRGVRQRP-WGKWAAEIRDPR----RaARVWLGTFDTAEEAARAYDKAAIDFRG 185
                 59********.**********82....48**********************99887 PP
Sequence ? help Back to Top
Protein Sequence    Length: 219 aa     Download sequence    
MFRKQAMTEV SAQLQRPAKR TKRQQQQQHQ QVVVIEDDEG TKTQNQRIPG CRLTREQEMS  60
VMVSALKRVI SGETGTGFPI PSSFEFATSS SFSPAICIGQ SPVESLETCE SCRIEGCLGC  120
QFFGTQVQAE KPKKKKYRGV RQRPWGKWAA EIRDPRRAAR VWLGTFDTAE EAARAYDKAA  180
IDFRGARAKL NFPFLNSHCK MIKSSSSSSS CKRRIRIPQ
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34410.11e-33ERF family protein