PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92573.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family bHLH
Protein Properties Length: 216aa    MW: 23661.3 Da    PI: 9.7846
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92573.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH26.51.2e-08127167954
                 HHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS
         HLH   9 ErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 
                  r RR+ri +++  L++l+P       +K++ a++L +A++Y+k L
  RWR92573.1 127 ARHRRERISERIRILQRLVPGG-----TKMDTASMLDEAIHYVKFL 167
                 699*****************87.....8****************98 PP
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    
MDMMMMMQMD KVLCGHYADI HESASMDFSC GTAAPVYDAL TLTSPPTLPF VGHVAREPPM  60
PAMFPEGELS GASPSSGAGQ KRSSVTAMRE MIFRIAAMQP IHIDPESVKP PKRRNVKISK  120
DPQSVAARHR RERISERIRI LQRLVPGGTK MDTASMLDEA IHYVKFLKTQ VQSLERAAAN  180
RNTGLGFPAG VSNVNYSLFG KGCQPTQNFS SAHLLS
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G50330.15e-44bHLH family protein