PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92730.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family ZF-HD
Protein Properties Length: 259aa    MW: 28632.7 Da    PI: 8.4029
Description ZF-HD family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92730.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1ZF-HD_dimer99.91.8e-3163120260
  ZF-HD_dimer   2 ekvrYkeClkNhAaslGghavDGCgEfmpsegeegtaaalkCaACgCHRnFHRreveee 60 
                  + vrY+eClkNhAa++Gg+a+DGCgEfmp  geegt +alkC+AC+CHRnFHR+eve e
   RWR92730.1  63 KVVRYRECLKNHAAAMGGNATDGCGEFMPC-GEEGTLEALKCSACNCHRNFHRKEVEGE 120
                  679**************************9.999*********************9875 PP
Sequence ? help Back to Top
Protein Sequence    Length: 259 aa     Download sequence    
MDISTHEGDI PMPITSSYAG GHGHGQMIHE PSLHNHIIAT SASPLTSNGP IPPNLEEHIP  60
YKKVVRYREC LKNHAAAMGG NATDGCGEFM PCGEEGTLEA LKCSACNCHR NFHRKEVEGE  120
SSSYECYHLK GRKVVGQKGV LIAGSEAFGY PTGSLIPRPP PQMIMSYNLG LPSESDEQEG  180
GGVMARPPLV KKRFRTKFTQ EQKEKMLDFA EKVGWRIQKQ EEGVVQQFCQ EIGVKRRVLK  240
VWMHNNKHSL AKKGSTPPT
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G02540.14e-72ZF-HD family protein