PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92731.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

E2F/DP

Protein Properties

Length: 424aa MW: 48094.8 Da PI: 6.5205

Description

E2F/DP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92731.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	E2F_TDP	74	1.6e-23	14	79	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvsedvknkrRRiYDilNVLealnliekkekneirwkg 71 rk+ksL+ll+++flkl+ ++ + v l+e+a +L v +rRRiYDi+NVLe+++++++k+kn+++wkg RWR92731.1 14 RKQKSLGLLCTNFLKLYDREGIESVGLDEAAVQL---GV--ERRRIYDIVNVLESVGVLSRKAKNRYSWKG 79 79***************999********.....****************************98 PP
2	E2F_TDP	68	1.2e-21	159	268	1	71
E2F_TDP 1 rkeksLrlltqkflkllekseegivtlnevakeLvse..................................dvknkrRRiYDilNVLealnliek.... 61 r+eksL+llt++f+kl+ ++++++v+l+e+a L+ + + k+RR+YDi+NVL+++nliek RWR92731.1 159 RREKSLGLLTRNFVKLFLTTNADTVSLDEAAMLLLCDpgstmmrsnepsesiiffsvpyvynhmtdplfedNSAAKVRRLYDIANVLSSMNLIEKthqn 257 689******************************************************************77789*****************9999 PP E2F_TDP 62 .kekneirwkg 71 ++k+++rw g RWR92731.1 258 eTKKPAFRWLG 268 99999999987 PP

Sequence ? help Back to Top
Protein Sequence Length: 424 aa Download sequence
MASSSLTSHL TYSRKQKSLG LLCTNFLKLY DREGIESVGL DEAAVQLGVE RRRIYDIVNV 60 LESVGVLSRK AKNRYSWKGI DSIPQALEEL KKEALRENYE NLPVTSYECQ GDSIENCEDD 120 KPSDLSGGET SQENSTLGSV PSGDSSFCSL SSKGKTDHRR EKSLGLLTRN FVKLFLTTNA 180 DTVSLDEAAM LLLCDPGSTM MRSNEPSESI IFFSVPYVYN HMTDPLFEDN SAAKVRRLYD 240 IANVLSSMNL IEKTHQNETK KPAFRWLGFN GKPDNDATVS PKSSNFEQSK KREFGSEITN 300 LEFVKRSRLI SLVDDKPIKE QMKHEDPSSQ RHLNQMLEHQ QQQQANSKGY VFGPFQPVLQ 360 DTEKKSLRSA QDLEAFASSY RPQYHNQALS DLFSHYMEAW KSWYMEVAQV NNHQPKRNAI 420 QQPS

Sequence ? help Back to Top

Protein Sequence Length: 424 aa Download sequence

MASSSLTSHL TYSRKQKSLG LLCTNFLKLY DREGIESVGL DEAAVQLGVE RRRIYDIVNV  60
LESVGVLSRK AKNRYSWKGI DSIPQALEEL KKEALRENYE NLPVTSYECQ GDSIENCEDD  120
KPSDLSGGET SQENSTLGSV PSGDSSFCSL SSKGKTDHRR EKSLGLLTRN FVKLFLTTNA  180
DTVSLDEAAM LLLCDPGSTM MRSNEPSESI IFFSVPYVYN HMTDPLFEDN SAAKVRRLYD  240
IANVLSSMNL IEKTHQNETK KPAFRWLGFN GKPDNDATVS PKSSNFEQSK KREFGSEITN  300
LEFVKRSRLI SLVDDKPIKE QMKHEDPSSQ RHLNQMLEHQ QQQQANSKGY VFGPFQPVLQ  360
DTEKKSLRSA QDLEAFASSY RPQYHNQALS DLFSHYMEAW KSWYMEVAQV NNHQPKRNAI  420
QQPS

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G48160.2	1e-101	E2F/DP family protein