PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

RWR92748.1

Organism

Cinnamomum micranthum f. kanehirae

Taxonomic ID

337451

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum

Family

NAC

Protein Properties

Length: 310aa MW: 35843.4 Da PI: 5.8855

Description

NAC family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
RWR92748.1	genome	NCBI	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	NAM	167.6	4.2e-52	6	133	1	128
NAM 1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk.kge 98 lppGfrFhPtdeelv++yL++k++++++ + +i+e+d+yk++Pw Lp + +ekewyfFs+rd+ky++g+r+nra+ sgyWkatg dk++ + + + RWR92748.1 6 LPPGFRFHPTDEELVTHYLCRKCASQSIAV-PIIAEIDLYKFDPWLLPGLALYGEKEWYFFSPRDRKYPNGSRPNRAAGSGYWKATGADKPIRPNgSPK 103 79***********************999.88***********6555679**********************************975566 PP NAM 99 lvglkktLvfykgrapkgektdWvmheyrl 128 vg+kk Lvfy+g+apkgekt+W+mheyrl RWR92748.1 104 PVGIKKALVFYTGKAPKGEKTNWIMHEYRL 133 7*************************98 PP

Sequence ? help Back to Top
Protein Sequence Length: 310 aa Download sequence
MGDLELPPGF RFHPTDEELV THYLCRKCAS QSIAVPIIAE IDLYKFDPWL LPGLALYGEK 60 EWYFFSPRDR KYPNGSRPNR AAGSGYWKAT GADKPIRPNG SPKPVGIKKA LVFYTGKAPK 120 GEKTNWIMHE YRLADVDRSA RKKNSLRLDD WVLCRIYNKK GSVESKQQRP KNLPENEMEE 180 EVEDQEQDQK PEILTQAHHQ PMTPPVLNDF PYFDSSESMP HLQPTDSSCS EHVISSDFTC 240 DREVQSEPRW NTNWQSTLQI PNINMDVIRP IDDNTNTNHN PFLSQLDGLQ LSPMFRDPYQ 300 DVLMYLQKPF

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G01720.1	1e-125	NAC family protein