PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID RWR92779.1
Organism
Cinnamomum micranthum f. kanehirae
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Magnoliidae; Laurales; Lauraceae; Cinnamomum; Cinnamomum micranthum
Family GATA
Protein Properties Length: 169aa    MW: 19097.8 Da    PI: 8.8916
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
RWR92779.1genomeNCBIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA59.34.9e-19100134135
        GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                 Cs+C++ +Tp+WR gp g+ktLCnaCG++y++ +l
  RWR92779.1 100 CSHCKAETTPQWRAGPLGPKTLCNACGVRYKSGRL 134
                 *******************************9885 PP
Sequence ? help Back to Top
Protein Sequence    Length: 169 aa     Download sequence    
MAILDNIPDF DEYSEEELAN ELCVPQDSIE DLPWLFSKEP LYKRPHMSPR TCREEGKSDE  60
GHGRQVPGKP RSKRAGGRTW SLHSPLPLGG SSALPMKRCC SHCKAETTPQ WRAGPLGPKT  120
LCNACGVRYK SGRLVPEYRP AASPTFQRDI HSNSHKKIMR MREGKVERE
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G36240.14e-37GATA family protein